单纯形加速法拟合生态学中的非线性模型

本文以Logistic模型,Taylor幂法则模型,Holling功能反应模型,以及种群内禀增长力Rm等模型的拟合和参数估计为例,探讨单纯形加速法在生态模型优化拟合和参数估计中的应用.结果表明,单纯形加速法拟合生态学中的非线性模型不仅适用广泛,而且拟合过程是直接求原来非线性模型的最优拟合,因而优于生态学中通常使用的将原模型“线性化后再拟合”的方法,而与其它一些最优化方法,如:麦夸方法、枚举选优法等比较,由于单纯形法不需计算目标函数的偏导数,因而计算不受目标函数及其偏导函数复杂程度的限制,而且对于各种模型其求优计算过程十分相似,可以编制统一的计算程序.本研究所编制的计算机程序对于本文未提到的其它一些模型也是完全适用的,在应用时仅需修改定义目标函数的自定义函数语句即可.研究也发现,在求优过程中,只要搜索系数选择适当和实际数据合理,是可以保证寻优成功的.     

Enzymatic hydrolysis of lignocellulosic materials: II. Experimental investigations of theoretical hydrolysis--process models for an increased enzyme recovery

Stream pretreatment of wheat straw solubilized most of the xylan present. Xylose and other sugars were recovered by washing the substrate with water but only a minor part (34%) was monomeric. Treatment of this solutions with celulases and hemicellulases improved the yield of monomeric sugars to 69%, the main product being xylose. Some xylose was also obtained during enzymatic hydrolysis of the solid substrate although the pretreatment step contributed 64% (mean value) of total xylose formed. A reference model, No. 1, and two other models, Nos. 2 and 4, described in the first part of this article series (this issue) have been studied experimentally and results confirm the theoretical conclusions. An uninterrupted hydrolysis over a given time period leads to a lower degree of saccharification than when hydrolysate is withdrawn several times. Saccharification is also favored if the residue is removed at a late stage, i.e., at the end of the 24 h hydrolysis cycle. Extended recirculation of the enzymes during a 4 x 24-h experimental period gave the following average yields of saccharification on a 24-h basis: 65% (Reference), 73% (Model 2), and 79% (Model 4). It is concluded that enzyme recovery with model 4 is 70% or more, while the Reference and Model 2 attain a lower level of recovery. The design of an improved hydrolysis model is also discussed.     

Vegetation zonation in dune slacks on the Leba Bar,Polish Baltic Sea coast

Vegetation zones in dune slacks on the Leba Bar on the Polish Baltic Sea coast are described. Plant colonization starts on moist sand in eastern ends of slacks, in the wake of receding mobile dunes. Communities on deflation ribs, dominated by psammophytic grasses, sedges and lichens, are structurally simple. Communities in troughs, dominated by species of fresh habitats, become structurally more complex in a western direction and they culminate with the Pinus silvestris forest. The main lines of vegetation variation correlate with groundwa-ter depth, micro topography, soil profile build-up and substrate acidification.     

Preinfection cell wall formation in roots and developing nodules ofAlnus rubra Bong

Summary The establishment of actinorhizal root nodules involves penetration of host cell walls and intracellular colonization by the nitrogen-fixing endosymbiont,Frankia (Actinomycetales). In the early stages of the infection process inAlnus, unusual cell walls with undulate profiles were observed in root tip meristematic derivatives, and in early (preinfection) derivatives of the nodule lobe meristem, inFrankia-inoculated plants. The irregular cell walls attached obliquely to preexisting walls, but were not discontinuous. Serial sections revealed that the unusual walls divided two daughter cells. Microtubules in bundled arrays were abundant near the undulate walls, and radiated in several planes. In the root tips, the anomalous cell walls were observed within one day of inoculation withFrankia.     

Optimization of batch processes involving simultaneous enzymatic and microbial reactions

Two general models for batch simultaneous enzymatic and microbial reaction (SEMR) processes are presented, the second derived from and simpler than the first and accounting for enzyme denaturation. Using the second model and parameter values from the literature, simulation was used to examine a range of enzyme addition rate strategies (in which the rate was a linear function of time) for a relatively fast ethanol fermentation and for a longer duration citric acid fermentation, both using cellulose as the substrate. For the ethanol process it is optimal (for a specific objective function which accounts for product value and enzyme cost) to add all the enzyme at the beginning of the process. But for the citric acid process a linearly decreasing enzyme addition rate, coupled with the addition of a small fraction of the enzyme at time zero, is better than pure batch operation or operation with the best constant enzyme feed rate.     

Protection against acute paraquat toxicity by ambroxol

An expression vector for G-CSF, pASLB3-3, was constructed and introduced into Namalwa KJM-1 cells (Hosoi et al., 1988), and cells resistant to 100 nM of methotrexate (MTX) were obtained. Among them, the highest producer, clone SC57, was selected and the productivity of this clone was further characterized. The maximal production of G-CSF was at the most 1.8 g/ml/day using a 25 cm² tissue culture flask, even though the cell number was above 7×10⁵ cells/ml. The limiting factors at high density were analyzed as the deficiency of nutrients, such as glucose, cysteine and serine, and pH control. The depression of specific G-CSF productivity per cell under the batch culture conditions was overcome by using a perfusion culture system, Biofermenter^TM (Sato, 1983) with modifications of nutrients supplementation by a dialysis membrane and/or dissolved oxygen (DO) supplementation by microsilicone fibers. ITPSGF medium was modified to elevate concentrations of amino acids and glucose by 2.0- and 2.5-times, respectively. Under the control of pH at 7.4 and DO at 3 ppm, the specific G-CSF productivity was not depressed even at high cell density (above 1×10⁷ cells/ml), and the amount of G-CSF reached 41 g/ml. These results indicated the possibility of finding the optimum culture conditions for the production of recombinant proteins by Namalwa KJM-1 cells.Abbreviations ABTS 2,2-Azino-di-(3-ethylbenzothiazoline)-6-sulfonic acid - BSA Bovine Serum Albumin - BSA-PBS Phosphate-buffered Saline without Ca²⁺ and Mg²⁺ containing Bovine Serum Albumin - dhfr Dihydrofolate Reductase - DO Dissolved Oxygen - G-CSF Granulocyte Colony-stimulating Factor - HEPES 4-(2-Hydroxyethyl)-1-piperazineethansulfonic Acid - IFN Interferon - MTX Methotrexate - PBS(-) Phosphate-buffered saline without Ca²⁺ and Mg²⁺ - Tween-PBS Phosphate-buffered saline without Ca²⁺ and Mg²⁺ containing 0.05% of Tween 20     

Nutritional criteria in machiguenga food production decisions: A linear-programming analysis

Machiguenga Indians of the Peruvian Amazon, like other low populationdensity, technologically “simple” peoples, produce ample food for a nutritious diet. Assuming that this is an intended outcome of their foodproduction strategy, to what extent is it a labor-efficient solution to the problem of producing a “balanced diet”? A linear-programming model of the “diet problem” is constructed with parameters reflecting the Machiguenga economy, and solutions are computed. These are then compared to observed Machiguenga food production; the degree of fit between model and behavior is examined and reasons for discrepancies are discussed.     

Computer control of fermentation processes

A review of computer control of fermentation processes is presented. Hardware and software technologies that have been used to implement computer control are discussed. This includes instrumentation, interfacing techniques, computer hardware configurations, data logging and documentation, displays and man-machine interaction, low-level control, back-up and error detection and programming techniques. Advanced control of fermentation processes with the utilization of modern control techniques is also presented. This topic is divided into steady state optimization and dynamic optimization. Finally, on-line estimation of bioreactor parameters for feedback control is presented.